The detailed information of tRNA gene sequence


Sequence ID>SRA1011425
Genome IDSRR020492.403877
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 18
End posion on genome 111
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ataattcgat
tRNA gene sequence 
GGAGAGGTGGCCGAGCTGGCTGAAGGCGCTCGCCTGCTAAGTGAGTATACCTCTATAAAG
GGTATCGAGGGTTCGAATCCCTCCCTCTCCGCAA
Downstream region at tRNA end position 
agtttattaa
Secondary structure (Cloverleaf model)
>SRA1011425	Ser	GCT
                   t      GCAA agtttattaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    T C G A        G      | | | | |     G
  G         G C C G       G A G G G     C
  G           | | |                 T T
  C         A G G C
    T G A          G     TATACCTCTATAAAGGGTATC
                    C - G
                    T - A
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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