The detailed information of tRNA gene sequence


Sequence ID>SRA1011439
Genome IDSRR020492.409766
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 182
End posion on genome 95
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gcccatctag
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTCGAATGTGCCCGACTCGAAATCGGGTGTGCCGAAAGGTACC
GGGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
tacggcaagt
Secondary structure (Cloverleaf model)
>SRA1011439	Ser	CGA
                   g      GCCA tacggcaagt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G         | | +                 T T
    T       A T G T
      C G A        G     TGTGCCGAAAGGTACC
                    C - G
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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