The detailed information of tRNA gene sequence


Sequence ID>SRA1011447
Genome IDSRR020492.413777
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 140
End posion on genome 64
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
tagcgtattt
tRNA gene sequence 
GGGCCAGTAGCTCAGCCGGTTAGAGCGCAGTCCTGATAAGACTGAGGTCCCTGGTTCGAG
TCCAGGCTGGCCCACCA
Downstream region at tRNA end position 
ttttcaaaag
Secondary structure (Cloverleaf model)
>SRA1011447	Ile	GAT
                   t      ACCA ttttcaaaag
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     G G A C C     A
      C G A        A      | | | | |     G
    C       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    G - C
                    T - A
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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