The detailed information of tRNA gene sequence


Sequence ID>SRA1011453
Genome IDSRR020492.414954
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 283
End posion on genome 206
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gtcatttttt
tRNA gene sequence 
GGGCCCTTAGCTCAGTTTGGTTAGAGCGCTCCGCTCATAACGGAGTGGTCCTAGGTTCAA
GTCCTAGAGGGCCCACCA
Downstream region at tRNA end position 
gaaaatctag
Secondary structure (Cloverleaf model)
>SRA1011453	Met	CAT
                   t      ACCA gaaaatctag
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A          T G
                    T     G A T C C     A
    T T G A        A      | | | | |     A
  T         C T C G       C T A G G     C
  G         | | | |                 T T
  G         G A G C
    T T A          G     TGGTC
                    C - G
                    T - A
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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