The detailed information of tRNA gene sequence


Sequence ID>SRA1011465
Genome IDSRR020492.421237
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 126
End posion on genome 41
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
nnnnnttttT
tRNA gene sequence 
GCAGAGGTCGCTTAGCCTGGTAGAGCGCGGGCCTTGAGAGCCTGTGTGCGCAAGCACGCG
GGGGTTCGAATCCCTCTCTCTGCGTtt
Downstream region at tRNA end position 
gttatttacc
Secondary structure (Cloverleaf model)
>SRA1011465	Ser	TGA
                   T      GTtt gttatttacc
                     G - C
                     C - G
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      C G A        C      | + | | |     G
    C       T T C G       G G G G G     C
    T       + | | |                 T T
    G       G A G C
      G T A        G     TGTGCGCAAGCACGC
                    C - G
                    G + T
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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