The detailed information of tRNA gene sequence


Sequence ID>SRA1011478
Genome IDSRR020492.426182
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 230
End posion on genome 158
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
atagcgccgc
tRNA gene sequence 
GCCCCGGTAGCTCAAATGGAAGAGCGAGGCTCTCCTAAAGCCTAGGTTGGGGGTTCAAGT
CCCTCCCGGGGTAttt
Downstream region at tRNA end position 
gtctgagagc
Secondary structure (Cloverleaf model)
>SRA1011478	Arg	CCT
                   c      Attt gtctgagagc
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T G
                    T     C T C C C     A
      A A A        A      | + | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      A A          G     AGGTT
                    A - T
                    G - C
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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