The detailed information of tRNA gene sequence


Sequence ID>SRA1011480
Genome IDSRR020492.426835
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 31
End posion on genome 108
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
atgtaatacg
tRNA gene sequence 
TGGGGCGTAGTTCAGTTGGTTTAGAACGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCGA
GTCCCGTCGCTCCCGCCA
Downstream region at tRNA end position 
ttatattcgc
Secondary structure (Cloverleaf model)
>SRA1011480	Asp	GTC
                   g      GCCA ttatattcgc
                     T   C
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C          T G
                    T     T G C C C     A
    T T G A        A      + | | | |     G
  G         C T T G       G C G G G     C
  G         | | | |                 T T
  T         G A A C
    T T A          G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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