The detailed information of tRNA gene sequence


Sequence ID>SRA1011481
Genome IDSRR020492.426950
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 78
End posion on genome 155
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gttacaaaag
tRNA gene sequence 
AATCTAGTAGTTCAGTAGGTTTAGAATCCCCGCCTGTCACGCGGGAGGTCACGAGTTCGA
GTCTCGTCTAGATCGCTA
Downstream region at tRNA end position 
ttacaaacta
Secondary structure (Cloverleaf model)
>SRA1011481	Asp	GTC
                   g      GCTA ttacaaacta
                     A   C
                     A - T
                     T - A
                     C - G
                     T - A
                     A - T
                     G - C          T G
                    T     T G C T C     A
    A T G A        A      | | | | |     G
  G         C T T G       A C G A G     C
  G         | | | +                 T T
  T         G A A T
    T T A          C     AGGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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