The detailed information of tRNA gene sequence


Sequence ID>SRA1011501
Genome IDSRR020492.436158
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 20
End posion on genome 110
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tttccttttt
tRNA gene sequence 
GGAGGGGTGGCAGAGTCTGGCTGATTGCACTGGTCTTGAAAACCAGCATGTCTTATGGGC
ATCGGGGGTTCGAATCCCTCCCCCTCCGCTA
Downstream region at tRNA end position 
aattactata
Secondary structure (Cloverleaf model)
>SRA1011501	Ser	TGA
                   t      GCTA aattactata
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
    C T G A        G      | + | | |     G
  T         G A C G       G G G G G     C
  G         + | | |                 T T
  G         T T G C
    C T G A        A     CATGTCTTATGGGCATC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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