The detailed information of tRNA gene sequence


Sequence ID>SRA1011510
Genome IDSRR020492.439903
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 276
End posion on genome 200
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
nnncctcttt
tRNA gene sequence 
CGGAGTGTAGCGCAGCTTGGTAGCGTATCTGGTTTGGGACCAGGTGGTCGGGGGTTCAAA
TCCCTCCACTCCGACCA
Downstream region at tRNA end position 
aaaattattg
Secondary structure (Cloverleaf model)
>SRA1011510	Pro	TGG
                   t      ACCA aaaattattg
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T A
                    T     C T C C C     A
      C G A        A      | + | | |     A
    T       C G C G       G G G G G     C
    T       | | | +                 T T
    G       G C G T
      G T A        A     TGGTC
                    T + G
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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