The detailed information of tRNA gene sequence


Sequence ID>SRA1011536
Genome IDSRR020492.453335
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 134
End posion on genome 58
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttgttgtttg
tRNA gene sequence 
GGGCCTGTAACTCAGCTTGGTAGAGTACCCGACTCATAATCGGGGAGCCACGGGATCGAA
GCCCATCAGGCCCACCA
Downstream region at tRNA end position 
ctttattcaa
Secondary structure (Cloverleaf model)
>SRA1011536	Met	CAT
                   g      ACCA ctttattcaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          G A
                    T     T A C C C     A
      C G A        A      |   | | |     G
    T       C T C A       A C G G G     C
    T       | | | |                 A T
    G       G A G T
      G T A        A     GAGCC
                    C - G
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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