The detailed information of tRNA gene sequence


Sequence ID>SRA1011539
Genome IDSRR020492.455705
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 5
End posion on genome 81
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
nnnnnnacgt
tRNA gene sequence 
GCCCCTGTAGCTCAGTTGGATAGAGCGGCGGCGTCCTAAGTCGCGCGTCGGGGGTTCGAG
TCCCTCCAGGGGTACCA
Downstream region at tRNA end position 
ttagattcca
Secondary structure (Cloverleaf model)
>SRA1011539	Arg	CCT
                   t      ACCA ttagattcca
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A
                     G - C          T G
                    T     C T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        G     GCGTC
                    G - C
                    C - G
                    G - C
                    G + T
                    C - G
                  G       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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