The detailed information of tRNA gene sequence


Sequence ID>SRA1011540
Genome IDSRR020492.455705
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 151
End posion on genome 228
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position
agctcatcgc
tRNA gene sequence
AGGAGCGTAGCTCAGTCTGGCCAGAGCGCTGGTCTCCAAAACCAGTGGTCGCGGGTTCGA
ATCCTGCCGCTCCTGCCA
Downstream region at tRNA end position
aatttaggca
Secondary structure (Cloverleaf model)
>SRA1011540	Trp	CCA
                   c      GCCA aatttaggca
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     C G T C C     A
    C T G A        A      | | + | |     G
  T         C T C G       G C G G G     C
  G         | | | |                 T T
  G         G A G C
    C C A          G     TGGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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