The detailed information of tRNA gene sequence


Sequence ID>SRA1011542
Genome IDSRR020492.456583
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 23
End posion on genome 111
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
taaaatagaT
tRNA gene sequence 
GGAGAGGTGCTAGAGTGGTCGAATAGGCGCGCTTGGAAAGCGCGTGAACTGGCAACAGTT
CCATGGGTTCGAATCCCATCCTCTCCGAat
Downstream region at tRNA end position 
taataataaa
Secondary structure (Cloverleaf model)
>SRA1011542	Ser	GGA
                   T      GAat taataataaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T A C C C     A
      T G A        G      | | | | |     G
    G       G A T C       A T G G G     C
    G         | | |                 T T
    T       A T A G
      C G A        G     TGAACTGGCAACAGTTCC
                    C - G
                    G - C
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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