The detailed information of tRNA gene sequence


Sequence ID>SRA1011550
Genome IDSRR020492.458491
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 26
End posion on genome 102
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
gtttttcatt
tRNA gene sequence 
GGGCCGGTCGTTCAGCCTGGTAGGATGCGCCCATGGCATGGGTGAGGTCAAGGGTTCAAA
TCCCTTCCGGTCCACCA
Downstream region at tRNA end position 
ttttttaata
Secondary structure (Cloverleaf model)
>SRA1011550	Ala	GGC
                   t      ACCA ttttttaata
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     T T C C C     A
      C G A        C      | | | | |     A
    C       C T T G       A A G G G     C
    T       | + | +                 T T
    G       G G A T
      G T A        G     AGGTC
                    C - G
                    G + T
                    C - G
                    C - G
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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