The detailed information of tRNA gene sequence


Sequence ID>SRA1011604
Genome IDSRR020493.16186
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 162
End posion on genome 249
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gaacgtacta
tRNA gene sequence 
GCGGGGGTCGCATAGTCTGGCCATTGCGTTGGATTGCTAATCCAATGGGATTTATCCCAC
GGGGGTTCAAATCCCCCTCCCCGCGCCA
Downstream region at tRNA end position 
tcctatcgtc
Secondary structure (Cloverleaf model)
>SRA1011604	Ser	GCT
                   a      GCCA tcctatcgtc
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     C C C C C     A
    C T G A        C      | | | | |     A
  T         T A C G       G G G G G     C
  G           | | |                 T T
  G         T T G C
    C C A          G     TGGGATTTATCCCAC
                    T - A
                    T - A
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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