The detailed information of tRNA gene sequence


Sequence ID>SRA1011608
Genome IDSRR020493.17592
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 5
End posion on genome 97
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
nnnnnngttt
tRNA gene sequence 
GGTGAGGTGGGTGAGCTGGTTTAAACCAGGAGTTTGCTAAACTTCCGTAGGTGTAACAAT
CTACCGCGAGTTCGAATCTCGCCCTCACCGCCA
Downstream region at tRNA end position 
actaattaaa
Secondary structure (Cloverleaf model)
>SRA1011608	Ser	GCT
                   t      GCCA actaattaaa
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C T C     A
    T C G A        G      | | | | |     G
  G         G T G G       G C G A G     C
  G           | | |                 T T
  T         A A C C
    T T A          A     CGTAGGTGTAACAATCTACC
                    G - C
                    G + T
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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