The detailed information of tRNA gene sequence


Sequence ID>SRA1011650
Genome IDSRR020493.30891
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 77
End posion on genome 3
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ttaatcaatt
tRNA gene sequence 
AGGGGTAAAGTGTTAATGGTTGCACGTCAGACTCCAAATCTGAAAGACAGGGTTCGATTC
CTTGTGCCTCTGCCA
Downstream region at tRNA end position 
atnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1011650	Trp	CCA
                   t      GCCA atnnnnnnnn
                     A - T
                     G - C
                     G + T
                     G - C
                     G - C
                     T + G
                     A - T          T T
                    A     G T T C C     A
      A A T        A      | | + | |     G
    T       T G T G       C A G G G     C
    G       + | | |                 T T
    G       G C A C
      T T          G     AAGA
                    T - A
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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