The detailed information of tRNA gene sequence


Sequence ID>SRA1011654
Genome IDSRR020493.34036
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 67
End posion on genome 142
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
atatgttgcg
tRNA gene sequence 
AGGGATGTAGCTCAGCTGGAAGAGCACCTGCTTTGCAAGCAGGGGGTCGTGGGTTCAAGT
CCCATCATCTCCACAA
Downstream region at tRNA end position 
taaggtaacc
Secondary structure (Cloverleaf model)
>SRA1011654	Ala	TGC
                   g      ACAA taaggtaacc
                     A   C
                     G - C
                     G + T
                     G - C
                     A - T
                     T - A
                     G - C          T G
                    T     T A C C C     A
      C G A        A      + | | | |     A
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      A A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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