The detailed information of tRNA gene sequence


Sequence ID>SRA1011666
Genome IDSRR020493.38122
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 118
End posion on genome 191
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tcacatcagt
tRNA gene sequence 
GGCCCGATGGCAGAGTGGTTATGCAGCGGTTTGCAAAACCGTGTACATCGGTTCAATTCC
GGTTCGGGCCTCCA
Downstream region at tRNA end position 
cttattttta
Secondary structure (Cloverleaf model)
>SRA1011666	Cys	GCA
                   t      TCCA cttattttta
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     A - T          T T
                    T     T G G C C     A
        G A        G      | + | | |     A
      T     G A C G       A T C G G     C
      G       | | |                 T T
      G     A T G C
        T T        A     GTAC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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