The detailed information of tRNA gene sequence


Sequence ID>SRA1011678
Genome IDSRR020493.40947
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 20
End posion on genome 110
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
caaatttctt
tRNA gene sequence 
GGAAGAGTGGGTGAGAGGCTTAAACCAGTCGTTTGCTAAATGACCGTGCGAGAAACTTGT
ACCGAGGGTTCGAATCCCTCCTCTTCCGCCA
Downstream region at tRNA end position 
tttttaaaac
Secondary structure (Cloverleaf model)
>SRA1011678	Ser	GCT
                   t      GCCA tttttaaaac
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G T G G       G A G G G     C
    G         | | |                 T T
    C       A A C C
      T T A        A     CGTGCGAGAAACTTGTACC
                    G - C
                    T - A
                    C - G
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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