The detailed information of tRNA gene sequence


Sequence ID>SRA1011682
Genome IDSRR020493.43558
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 186
End posion on genome 110
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
cagaatagcg
tRNA gene sequence 
GGGCCAGTAGCTTAGCTAGGTAAAGCGATCGGCTCTTAACCGATCGACCGTGGGTTCGAA
TCCCATCTGGCCCGCCA
Downstream region at tRNA end position 
ctatgtgtag
Secondary structure (Cloverleaf model)
>SRA1011682	Lys	CTT
                   g      GCCA ctatgtgtag
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T A
                    T     T A C C C     A
      C G A        A      + | | | |     G
    T       T T C G       G T G G G     C
    A       | | | |                 T T
    G       A A G C
      G T A        G     CGACC
                    A - T
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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