The detailed information of tRNA gene sequence


Sequence ID>SRA1011735
Genome IDSRR020493.61524
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 259
End posion on genome 183
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
nnnnttcaat
tRNA gene sequence 
GGCGGGGTAGCTCAGTTGGTTAGAGCGCGGGACTCATAAGCCCGAGGTCAGTGGTTCGAT
CCCACTTCCCGCTACCA
Downstream region at tRNA end position 
taaaattaat
Secondary structure (Cloverleaf model)
>SRA1011735	Met	CAT
                   t      ACCA taaaattaat
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T          C T
                    T     T C A C C     A
      T G A        A      | | | | |     G
    T       C T C G       A G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    G - C
                    G - C
                    G - C
                    A   G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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