The detailed information of tRNA gene sequence


Sequence ID>SRA1011757
Genome IDSRR020493.68160
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 256
End posion on genome 174
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
nnnnntaatt
tRNA gene sequence 
GGCTGGATGGCCGAGTGGTCTAAGGCGCTGGTTTTAGGCACCAGTCTCTTCGGAGGCGTG
GGTTCGAACCCCACTTCAGTCACtt
Downstream region at tRNA end position 
ttgcttcgtg
Secondary structure (Cloverleaf model)
>SRA1011757	Leu	TAG
                   t      ACtt ttgcttcgtg
                     G - C
                     G + T
                     C - G
                     T - A
                     G - C
                     G + T
                     A - T          C A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      C T A        G     TCTCTTCGGAGGC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  T       C
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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