The detailed information of tRNA gene sequence


Sequence ID>SRA1011777
Genome IDSRR020493.75340
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 53
End posion on genome 124
Amino Acid Ala
Anticodon AGC
Upstream region at tRNA start position 
aataatgatt
tRNA gene sequence 
GGGGGTGTAACTCATTGGTAGAGTATCTCTGTAGCGAAGAGAAAGTAGTTGGTTCGATTC
CACCCACCTCCTttg
Downstream region at tRNA end position 
gtgatttgaa
Secondary structure (Cloverleaf model)
>SRA1011777	Ala	AGC
                   t      Tttg gtgatttgaa
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     T - A
                     G - C          T T
                    T     C C A C C     A
        T A        A      |   | | |     G
      T     C T C A       G T T G G     C
      G     | | | |                 T T
      G     G A G T
        T A        A     AAGTA
                    T - A
                    C - G
                    T - A
                    C - G
                    T - A
                  G       A
                  T       G
                    A G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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