The detailed information of tRNA gene sequence


Sequence ID>SRA1011780
Genome IDSRR020493.75993
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 36
End posion on genome 122
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aataaaagtT
tRNA gene sequence 
GGAGAGGTGGCTGAGAGGTCGAAAGCGAACGACTCGAAATCGTTTAATAGGAAACTATTC
GTGGGTTCGAATCCCACCCTCTCCGTat
Downstream region at tRNA end position 
tattaacgtg
Secondary structure (Cloverleaf model)
>SRA1011780	Ser	CGA
                   T      GTat tattaacgtg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      A G A        G      | | | | |     G
    G       G T C G       G T G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TAATAGGAAACTATTC
                    A - T
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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