The detailed information of tRNA gene sequence


Sequence ID>SRA1011793
Genome IDSRR020493.80766
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 142
End posion on genome 228
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
tgaataaaag
tRNA gene sequence 
GCGAGTGTGGCGGAATCGGTAGACGCAGCGGATTCAAAATCCGCCGCCCGCAAGGGCTTG
GGGGTTCAAGTCCCCCCACTCGTACCA
Downstream region at tRNA end position 
tatctcttgt
Secondary structure (Cloverleaf model)
>SRA1011793	Leu	CAA
                   g      ACCA tatctcttgt
                     G + T
                     C - G
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T G
                    T     C C C C C     A
      T A A        G      | | | | |     A
    C       G G C G       G G G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        A     CGCCCGCAAGGGCTT
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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