The detailed information of tRNA gene sequence


Sequence ID>SRA1011826
Genome IDSRR020493.89289
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 128
End posion on genome 53
Amino Acid Ile
Anticodon AAT
Upstream region at tRNA start position 
atgtatacgT
tRNA gene sequence 
GCTCCTATGGCTCAGTTGGTCAGCGCGTCAGCCTAATAAGCTGAAGGTCGCGGTTCGAGC
CCGCGTGGGAGCATCg
Downstream region at tRNA end position 
ttttcgtact
Secondary structure (Cloverleaf model)
>SRA1011826	Ile	AAT
                   T      ATCg ttttcgtact
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     T + G
                     A - T          C G
                    T     G C G C C     A
      T G A        G      | | | | |     G
    T       C T C G       C G C G G     C
    G       |   | |                 T T
    G       G C G C
      T C A        G     AGGT
                    T - A
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    A A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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