The detailed information of tRNA gene sequence


Sequence ID>SRA1011840
Genome IDSRR020493.93886
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 96
End posion on genome 187
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
acgagcccgc
tRNA gene sequence 
GGAGGGGTGGCTGAGTGGCTGAAGGCGCCGGTTTGCTAAATCGTTAAAGGGAGCAATCCC
TTTCGGGGGTTCGAATCCCCCTCCCTCCGCCA
Downstream region at tRNA end position 
ttaagataac
Secondary structure (Cloverleaf model)
>SRA1011840	Ser	GCT
                   c      GCCA ttaagataac
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G G G G G     C
    G         + | |                 T T
    C       A G G C
      T G A        G     TAAAGGGAGCAATCCCTTTC
                    C   T
                    C - G
                    G - C
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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