The detailed information of tRNA gene sequence


Sequence ID>SRA1011875
Genome IDSRR020493.103509
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 222
End posion on genome 133
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
atattggtcc
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTCGAAAGCGGCACCCTGCTAAGGTGTTAGACGGGCAACTGTC
TCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
ttaatttttt
Secondary structure (Cloverleaf model)
>SRA1011875	Ser	GCT
                   c      GCCA ttaatttttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TAGACGGGCAACTGTCTC
                    G + T
                    C - G
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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