The detailed information of tRNA gene sequence


Sequence ID>SRA1011906
Genome IDSRR020493.117868
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 193
End posion on genome 270
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ataaaaaaat
tRNA gene sequence 
GGCGGAGTAGCTCAGGTGGTTAGAGCAGCGGAATCATAATCCGCGTGTCGGGGGGTTCAA
GTCCCTCCTCCGCTACCA
Downstream region at tRNA end position 
tcaaaacttg
Secondary structure (Cloverleaf model)
>SRA1011906	Met	CAT
                   t      ACCA tcaaaacttg
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C T C C C     A
      G G A        A      | + | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTCG
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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