The detailed information of tRNA gene sequence


Sequence ID>SRA1011939
Genome IDSRR020493.128165
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 151
End posion on genome 75
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ggactcgcgt
tRNA gene sequence 
AGGGGTATAGCTCAGTTGGTAGAGCGGCGGTCTCCAAAACCGTAGGTCGCGGGTTCGAAC
CCTGCTGTCCCCTGCC
Downstream region at tRNA end position 
Aactgcaccc
Secondary structure (Cloverleaf model)
>SRA1011939	Trp	CCA
                   t      TGCC Aactgcaccc
                     A   C
                     G - C
                     G - C
                     G - C
                     G + T
                     T + G
                     A - T          C A
                    T     C G T C C     A
      T G A        A      | | + | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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