The detailed information of tRNA gene sequence


Sequence ID>SRA1011965
Genome IDSRR020493.136776
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 271
End posion on genome 196
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
nnnnnnnntt
tRNA gene sequence 
CGGGGTGTAGCGCAGCCTGGTAGCGCACTTGGTTTGGGACCAAGGGGCCGTAGGTTCAAA
TCCTACCACCCGACCAt
Downstream region at tRNA end position 
tttatgaaaa
Secondary structure (Cloverleaf model)
>SRA1011965	Pro	TGG
                   t      CCAt tttatgaaaa
                     C   A
                     G   G
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C A T C C     A
      C G A        A      | | | | |     A
    C       C G C G       G T A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGCC
                    C - G
                    T - A
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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