The detailed information of tRNA gene sequence


Sequence ID>SRA1011972
Genome IDSRR020493.139174
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 87
End posion on genome 173
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ttaaacattC
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTCGAAAGCGAACGATTCGAAATCGTTTAATAGGAAACTATTC
GTGGGTTCGAATCCCACCCTCTCCGTtt
Downstream region at tRNA end position 
tttttgtgtc
Secondary structure (Cloverleaf model)
>SRA1011972	Ser	CGA
                   C      GTtt tttttgtgtc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G T G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TAATAGGAAACTATTC
                    A - T
                    A - T
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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