The detailed information of tRNA gene sequence


Sequence ID>SRA1011973
Genome IDSRR020493.140047
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 43
End posion on genome 117
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcattatttt
tRNA gene sequence 
GGCGGCGTAGCTCAGTTGGTTAGAGCACCGGAATCATAATCCGGGTGTCCGGGGTTCGAG
TCCCTGCGCCGCCACtc
Downstream region at tRNA end position 
atgaacattt
Secondary structure (Cloverleaf model)
>SRA1011973	Met	CAT
                   t      ACtc atgaacattt
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     G T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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