The detailed information of tRNA gene sequence


Sequence ID>SRA1011993
Genome IDSRR020493.147220
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 92
End posion on genome 16
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position
ttgcggatac
tRNA gene sequence
CGGGGCGTAGCTCAGTCTGGTAGAGTGTCTGCTTTGGGAGCAGAAAGTCGTTGGTTCGAA
TCCAGCCGCCCCGACCA
Downstream region at tRNA end position
agattatctg
Secondary structure (Cloverleaf model)
>SRA1011993	Pro	TGG
                   c      ACCA agattatctg
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C G A C C     A
      T G A        A      | + | | |     G
    C       C T C G       G T T G G     C
    T       | | | +                 T T
    G       G A G T
      G T A        G     AAGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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