The detailed information of tRNA gene sequence


Sequence ID>SRA1012022
Genome IDSRR020493.158084
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 187
End posion on genome 111
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tcaaactctt
tRNA gene sequence 
GGCTATGTAGCTCAGCTGGTTAGAGCGCAGCATTCATAATGCTGAGGTCCTTGGTTCAAG
TCCAAGCATAGCCACCA
Downstream region at tRNA end position 
ctaaagagtt
Secondary structure (Cloverleaf model)
>SRA1012022	Met	CAT
                   t      ACCA ctaaagagtt
                     G - C
                     G - C
                     C - G
                     T - A
                     A - T
                     T - A
                     G - C          T G
                    T     G A A C C     A
      C G A        A      | | | | |     A
    T       C T C G       C T T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    G - C
                    C - G
                    A - T
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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