The detailed information of tRNA gene sequence


Sequence ID>SRA1012024
Genome IDSRR020493.158166
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 90
End posion on genome 163
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gcagactaat
tRNA gene sequence 
GGCATTGTGGCCGAGTGGCTAGGCGGAGCTCTGCAAAAGCTTTTACAGCGGTTCGAATCC
GCTCGATGCCTCAA
Downstream region at tRNA end position 
gttagtattt
Secondary structure (Cloverleaf model)
>SRA1012024	Cys	GCA
                   t      TCAA gttagtattt
                     G - C
                     G - C
                     C - G
                     A - T
                     T - A
                     T + G
                     G - C          T A
                    T     T C G C C     A
        G A        G      | | | | |     G
      T     G C C G       A G C G G     C
      G       | | |                 T T
      G     A G G C
        C T        G     TTAC
                    G + T
                    A - T
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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