The detailed information of tRNA gene sequence


Sequence ID>SRA1012050
Genome IDSRR020493.165831
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 189
End posion on genome 115
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
tgtaattcgg
tRNA gene sequence 
GCTCATATAGCTCAGCGGTAGAGCACTTCCTTGGTAAGGAAGAGGTCACCGGTTCAAGTC
CGGTTATGAGCTCCA
Downstream region at tRNA end position 
ttattggcaa
Secondary structure (Cloverleaf model)
>SRA1012050	Thr	GGT
                   g      TCCA ttattggcaa
                     G - C
                     C - G
                     T - A
                     C - G
                     A - T
                     T - A
                     A - T          T G
                    T     T G G C C     A
        G A        A      | | | | |     A
      C     C T C G       A C C G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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