The detailed information of tRNA gene sequence


Sequence ID>SRA1012064
Genome IDSRR020493.170843
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 215
End posion on genome 139
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
agtccgtcct
tRNA gene sequence 
AGACCCGTAGCTCAGTTGGTTAGAGCGCTGTCTTGACATGGCAGAGGTCAGCAGTTCAAA
TCTGCTCGGGTCTACCA
Downstream region at tRNA end position 
ataaaggatt
Secondary structure (Cloverleaf model)
>SRA1012064	Val	GAC
                   t      ACCA ataaaggatt
                     A - T
                     G - C
                     A - T
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T C G T C     A
      T G A        A      | | | | |     A
    T       C T C G       A G C A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    T - A
                    G - C
                    T + G
                    C - G
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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