The detailed information of tRNA gene sequence


Sequence ID>SRA1012074
Genome IDSRR020493.173668
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 40
End posion on genome 133
Amino Acid Ile
Anticodon TAT
Upstream region at tRNA start position 
aagattttgt
tRNA gene sequence 
GGTCCTGTAGTTTAATGGTAAAACACCCGGCTTATACTCGGCACAGTCTCCAGATTAGAG
AGCGATGGGGGTTCGAATCCCCCCGGGACCACCA
Downstream region at tRNA end position 
atcttttttg
Secondary structure (Cloverleaf model)
>SRA1012074	Ile	TAT
                   t      ACCA atcttttttg
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     T + G
                     G - C          T A
                    T     C C C C C     A
        A A        A      | | | | |     G
      T     T T T G       G G G G G     C
      G     | | | |                 T T
      G     A A A C
        T A        A     ACAGTCTCCAGATTAGAGAGCGAT
                    C   C
                    C - G
                    C - G
                    G - C
                    G + T
                  C       C
                  T       A
                    T A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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