The detailed information of tRNA gene sequence


Sequence ID>SRA1012105
Genome IDSRR020493.181289
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 105
End posion on genome 182
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
aactcatttt
tRNA gene sequence 
CGGGGTGTAGCGTAGCCCGGTTATCGCGCCGCGTTTGGGACGCGGAGGTCGCAGGTTCGA
ATCCTGCCACCCCGACTA
Downstream region at tRNA end position 
gttaatttnn
Secondary structure (Cloverleaf model)
>SRA1012105	Pro	TGG
                   t      ACTA gttaatttnn
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C G T C C     A
    C C G A        A      | | | | |     G
  C         T G C G       G C A G G     C
  G           | | |                 T T
  G         T C G C
    T T A          G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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