The detailed information of tRNA gene sequence


Sequence ID>SRA1012123
Genome IDSRR020493.187147
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 152
End posion on genome 63
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
atattaaaaa
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTCGAAGGCGCACGCCTGGAACGCGTGTATACGAGAAATCGTA
TCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
tctacatcac
Secondary structure (Cloverleaf model)
>SRA1012123	Ser	GGA
                   a      GCCA tctacatcac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TATACGAGAAATCGTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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