The detailed information of tRNA gene sequence


Sequence ID>SRA1012130
Genome IDSRR020493.192097
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 199
End posion on genome 271
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
gtgattagag
tRNA gene sequence 
GGGGGATTAGCTCAGTTGGGAGAGCGCCTGATTTGCATTCAGGAGGTCAGCGGTTCGACC
CCGCTATCCTCCAann
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1012130	Ala	TGC
                   g      Aann nnnnnnnnnn
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     A - T
                     T - A          C C
                    T     T C G C C     A
      T G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  T       T
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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