The detailed information of tRNA gene sequence


Sequence ID>SRA1012142
Genome IDSRR020493.194778
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 117
End posion on genome 42
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
aatctaaaaa
tRNA gene sequence 
GGGTACCTGGTGTATGTGGTCGGCACAAACGCCTGAAAAGCGTTAGGTCCTGGTTCGATT
CCAGGGGTACCCACCT
Downstream region at tRNA end position 
taaaaacaaa
Secondary structure (Cloverleaf model)
>SRA1012142	Phe	GAA
                   a      ACCT taaaaacaaa
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T
                     C - G
                     C - G          T T
                    T     G G A C C     A
      G T A        G      | | | | |     G
    T       T G T G       C C T G G     C
    G       + | | |                 T T
    G       G C A C
      T C G        A     AGGT
                    A - T
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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