The detailed information of tRNA gene sequence


Sequence ID>SRA1012151
Genome IDSRR020493.199097
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 113
End posion on genome 38
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
ttagttgcaa
tRNA gene sequence 
GGGCGGTTAGCTCAGTTGGTAGAGCATCTCGTTTACACCGAGAATGTCGGGAGTTCGAGC
CTCTCACCGCCCACCA
Downstream region at tRNA end position 
ttaactatcc
Secondary structure (Cloverleaf model)
>SRA1012151	Val	TAC
                   a      ACCA ttaactatcc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A          C G
                    T     C T C T C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     ATGTC
                    T - A
                    C - G
                    T - A
                    C - G
                    G - C
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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