The detailed information of tRNA gene sequence


Sequence ID>SRA1012152
Genome IDSRR020493.199249
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 116
End posion on genome 214
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position
tgccgttcac
tRNA gene sequence
GGAGACGGATGCGTCACTGGTGGACGCCCCGGACTTCAAACCCGCGTGTATGGCTCTAAA
ACAGTCATTGGTAGGTTCGATTCCTGCCCGTCTCCGCCA
Downstream region at tRNA end position
acatacaaat
Secondary structure (Cloverleaf model)
>SRA1012152	SeC	TCA
                   c      GCCA acatacaaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C
                     G - C          T T
                    A     C G T C C     A
      C A C        T      | + | | |     G
    T       T G C G       G T A G G     C
    G       | | | |                 T T
    G       A C G C
      T G G        C     GTGTATGGCTCTAAAACAGTCATTG
                    C   C
                    C - G
                    G - C
                    G - C
                    A   C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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