The detailed information of tRNA gene sequence


Sequence ID>SRA1012162
Genome IDSRR020493.201792
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 200
End posion on genome 275
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
ctttaaaatT
tRNA gene sequence 
GCCCTTGTAGCTCAGCGGTAGAGCACTCCCTTGGTAAGGGAGAGGTCTCGGGTTCAAGTC
CCGATGAGGGCATCA
Downstream region at tRNA end position 
ctagaagcct
Secondary structure (Cloverleaf model)
>SRA1012162	Thr	GGT
                   T      ATCA ctagaagcct
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A
                     T + G
                     G + T          T G
                    T     A G C C C     A
        G A        A      | | | | |     A
      C     C T C G       T C G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AGGTC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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