The detailed information of tRNA gene sequence


Sequence ID>SRA1012169
Genome IDSRR020493.203219
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 77
End posion on genome 147
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
aatctttttc
tRNA gene sequence 
GGCGGCATGGCCAAGTGGTAAGGCAGAGGATTGCAAATCCTTTATCCCCAGTTCGAATCT
GGGTGCCGCCTtat
Downstream region at tRNA end position 
ttaatttctt
Secondary structure (Cloverleaf model)
>SRA1012169	Cys	GCA
                   c      Ttat ttaatttctt
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     A - T          T A
                    T     G G G T C     A
        G A        G      | | | | |     G
      T     A C C G       C C C A G     C
      G       | | |                 T T
      G     A G G C
        T A        A     TATC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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