The detailed information of tRNA gene sequence


Sequence ID>SRA1012182
Genome IDSRR020493.208241
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 135
End posion on genome 49
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position
tagttatctg
tRNA gene sequence
GGAGAGGTGGCCGAGTGGTTGAAGGCGCAGCACTGGAAATGCTGTATAGGGGCAACTTTA
TCGAGGGTTCGAATCCCTCTCTCTCCGttt
Downstream region at tRNA end position
tatattagtt
Secondary structure (Cloverleaf model)
>SRA1012182	Ser	GGA
                   g      Gttt tatattagtt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TATAGGGGCAACTTTATC
                    C - G
                    A - T
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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